CDS
| Accession Number | TCMCG015C56516 |
| gbkey | CDS |
| Protein Id | XP_027090118.1 |
| Location | complement(join(3578590..3578620,3579090..3579262,3580336..3580577,3581220..3581347,3582017..3582216,3582769..3582916,3583005..3583138,3583231..3583344,3583544..3583753)) |
| Gene | LOC113711143 |
| GeneID | 113711143 |
| Organism | Coffea arabica |
Protein
| Length | 459aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA506972 |
| db_source | XM_027234317.1 |
| Definition | protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Coffea arabica] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | WD domain, G-beta repeat |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14829
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0008150 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0048509 [VIEW IN EMBL-EBI] GO:0048519 [VIEW IN EMBL-EBI] GO:0050789 [VIEW IN EMBL-EBI] GO:0050793 [VIEW IN EMBL-EBI] GO:0051093 [VIEW IN EMBL-EBI] GO:0065007 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902183 [VIEW IN EMBL-EBI] GO:1902184 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGAAGCCGAGCTGGTGCTTGCTTCATCGCCGACCGACGCAGGCATCAGCTGCTGGGACCTTCGTTCAGGCACCGAGCACCTCCGCTTTCGCTCTTGCTCTTCTCCTGCCCACGGTCTCACCTCGGTCGCCGGCCGCTTTCTTGCCTCTTCTCAGCTCCGTGATTCCAAGTCCTCTTCCGGCTCCATCTTCTACTGGTCCTGGAATAAGCCTCAGCCGGAAGTCAAAAGCTTTCCTGCCGAACCTATCAACGCTCTTGCTTCTAACTGTGAAGGCACTTACATAGTTGGAGGCAGCGTTTCTGGAGAAATATATTTATGGGAGGTTGCAACTGGTAGATTGCTAAAGAGGTGGCACGCTCATTATAGGGCAGTTACCTGCTTAGTGTTCTCTGATGATCAGTTCCTTTTGATTTCTGGGGCAGAGGATGGCTCTGTTCGTGTGTGGTCGCTCCTCATGATATTTGATGATCAACGGAGGGAGGAAGCAAAATATCTGTACGAGTATAGTTTCTCTGAGCATACGTTAAAAGTCACTGATGTTGCGGCTGGTTATGGAGGATGCAATGCTATTATCGTGTCTTCTTCAGAGGATAGGACTTGCAAGGTATGGAGCTTATCTAGGGGGAAACTGTTGCGGAATATTGTTTTCCCATCAATAATTGACGCAGTTGTATTGGATCCTGGTGAGCATGTCTTCTATGCTGGTGGAAGAGATGGTAATATATACATTGCTGCACTTAATGCTCAAGTCAACAGTAGCAGCAATTATGGGTTCCATATCATTGGGTCATTAAGTGAACACAATAAAGCTATAACTTGCTTAGGATTGAGTATGGATGGATACCTATTGGTATCTGGATCAGAGGATGGGATGGTTCGAGTTTGGGACACTAGAACCCGGAACATTTTTCGTGTCTTTCGACATGCAAAAGGCCCTGTTAATAATGTCCTTGTCATTAGACAGCCATCACACTGCAATCCACGGACATCAATGAATTTCCAGGCTTTCTCATCAAGGAGACATGTACTACCATCACCACTAGAGAAGTATTCTTATTCACATGATGACAATATCGACACGAAGGCTTGCATCAATTGCCAGACATACAATAACATTGCAGATGTTCCAAATATTAGTTTTCAAACCATGCAGAATCAAATAAAAGAACTTCAGCAACAAGGTTCTTCTGCTGCTACTGAAATGGAGATGGAAAGGCTAAAGCTTGAGCGCAAAAGATCCATGCAAATGGTCCAGCAATGGAAGAAAATGTATGAAAATTTACATCAGTTCTGTGTATCTGAGCTTTTGGATGGAAATGAGCATGAGAGTGCCAGCAGACACAATATTAGGACAGAGGATGCAGGAAATAAAGTCTGA |
| Protein: MEAELVLASSPTDAGISCWDLRSGTEHLRFRSCSSPAHGLTSVAGRFLASSQLRDSKSSSGSIFYWSWNKPQPEVKSFPAEPINALASNCEGTYIVGGSVSGEIYLWEVATGRLLKRWHAHYRAVTCLVFSDDQFLLISGAEDGSVRVWSLLMIFDDQRREEAKYLYEYSFSEHTLKVTDVAAGYGGCNAIIVSSSEDRTCKVWSLSRGKLLRNIVFPSIIDAVVLDPGEHVFYAGGRDGNIYIAALNAQVNSSSNYGFHIIGSLSEHNKAITCLGLSMDGYLLVSGSEDGMVRVWDTRTRNIFRVFRHAKGPVNNVLVIRQPSHCNPRTSMNFQAFSSRRHVLPSPLEKYSYSHDDNIDTKACINCQTYNNIADVPNISFQTMQNQIKELQQQGSSAATEMEMERLKLERKRSMQMVQQWKKMYENLHQFCVSELLDGNEHESASRHNIRTEDAGNKV |